TY - BOOK TI - Comprehensive biophysics: biophysics techniques for structural characterization of macromolecules U1 - 571.4 PY - 2012/// CY - Amsterdam PB - Elsevier N1 - VOLUME 1 Biophysical Techniques for Structural Characterization of Macromolecules 1.1 Volume Introduction HJ Dyson 1 Overview and Historical 1.2 Cantor and Schimmel - 30 Years Later C Cantor and P Schimmel 2 Protein Production Strategies for High-Throughput Structure Determination 1.3 Efficient Strategies for Production of Eukaryotic Proteins JD Cossar and CHArrowsmith 4 X-ray Crystallography 1.4 X-ray Crystallography: Crystallization EE Abola, VCherezov, and RC Stevens 34 1.5 X-ray Crystallography; Data Collection Strategies and Resources Gonzalez 64 1.6 Phasing of X-ray Data I Uson 92 1.7 Refinement of X-ray Crystal Structures AT Bninger and PD Adams 105 1.8 Structure Validation and Analysis M-A Elsliger and IA Wilson " 116 NMR Spectroscopy 1.9 Introduction to Solution State NMR Spectroscopy HJ Dyson and AG Palmer III 136 1.10 Solid State NMR Methods M Baldus 160 1.11 The Hybrid Solution/Solid-State NMR Method for Membrane Protein Structure Determination G Veglia, N} Traaseth, L Shi, R Verardi, T Gopinath, and M Gustavsson 182 1.12 Labeling Techniques M Takeda and M Kainosho 199 1.13 NMR Spectroscopy: NMR Relaxation Methods AG Palmer III 216 Electron Microscopy 1.14 Structure Determination of Macromolecular Complexes by Cryo-Electron Microscopy In vitro and in situ F Forster, E Villfi, D Thomas, A Korinek, and W Baumeister 245 1.15 Analysis of 2-D Crystals of Membrane Proteins by Electron Microscopy Abeyrathne, MArheit, F Kebbel, D Castano-Diez, KN Goldie, M Chami, H Stahlberg, L Renault, and W Kuhlbrandt 277 vi Contents 1.16 Cryo-Electron Microscopy and Tomography of Virus Particles RH Rochat and WChiu 311 Mass Spectrometry 1.17 Mass Spectrometry A Nakorchevsky and JR Yates 341 SAXS 1.18 Small and Wide Angle X-ray Scattering from Biological Macromolecules and their Complexes in Solution S Doniach and J Lipfert 376 Ultrafast Spectroscopic Techniques 1.19 Ultrafast Structural Dynamics of Biological Systems M Chergui 398 EPR and Other Electron Spectroscopies 1.20 Electron Magnetic Resonance CJ Bender 425 Computation 1.21 Computation of Structure, Dynamics, and Thermodynamics of Proteins S Otdziej, C Czaplewski, A Liwo, }A Vila, and HA Scheraga 494 Fast Flow 1.22 Rapid Mixing Techniques for the Study of Enzyme Catalysis S Mitic and S de Vries 514 Other Spectroscopy - UV-VIs, CD, Raman, VIbrational CD Applied in Biophysical Research 1.23 Optical Spectroscopy RSchweitzer-Stenner and JB Sojfer 533 FRET/Fluorescence 1.24 Fluorescence and FRET: Theoretical Concepts 101 RM Clegg 592 ER -