Becker, Oren M.
A Guide to Biomolecular Simulation/
Oren M. Becker and Martin Karplus
- Netherlands Springer, 2006.
- ix, 231 p. ill., 25 cm.
Introduction: Note to the Student; Introduction: Note to the Instructor; Introduction: UNIX; Introduction: CHARMM Primer; Introduction: CHARMM Template Files; Lab 1: Introduction to Molecular Visualization; Lab 2: Energy and Minimization; Lab 3: Minimization and Analysis; Lab 4: Conformational Analysis; Lab 5:Basic Molecular Dynamics in Vacuum and in Solution; Lab 6: Molecular Dynamics and Analysis: Myoglobin; Lab 7: Ligand Dynamics in Myoglobin; Lab 8: Normal Mode Analysis; Lab 9: Free Energy Calculations; Lab 10: Minimum Energy Paths; Lab 11: Multiple Copy Simultaneous Search; Lab 12: Hemoglobin Cooperativity: the T-R transition.
9781402035869
Molecular dynamics -- Mathematical models.
Biomolecules -- Mathematical models.
Molecular biology -- Research.
571.4 / BEC